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Table 4 Relative abundances (%) of putative core microbiome members of bacterial communities associated with visibly healthy and infected skin around the gills and visibly healthy skin on the back of black-tip reef sharks (Carcharhinus melanopterus) collected in the Amirante Islands (Seychelles), presented for a) gills and b) backs of sharks. Bacterial relative abundances are averaged within sites (data presented as means ± SD). Taxonomy: Numbers in brackets constitute bootstrap values; only bootstrap values < 100 are shown

From: Similar bacterial communities on healthy and injured skin of black tip reef sharks

Site
  West Ressource North Side East Ressource Fouquet Benjamin Taxonomy
a) Gills
 OTU00001 3.61 ± 2.95 2.86 ± 1.23 10.49 ± 3.76 8.61 ± 3.83 9.48 ± 5.54 f__Rhodobacteraceae_unclass.(86)
 OTU00002 5.11 ± 4.62 1.76 ± 1.59 4.24 ± 3.75 8.28 ± 7.16 9.04 ± 2.72 g__Alteromonas unclass.
 OTU00003 5.65 ± 1.87 1.21 ± 0.86 3.11 ± 1.50 2.53 ± 1.55 1.40 ± 1.20 f__Pelagibacteraceae_unclass.(99)
 OTU00004 1.45 ± 1.54 0.09 ± 0.11 3.19 ± 1.28 4.38 ± 2.57 3.28 ± 0.63 o__Flavobacteriales_unclass.
 OTU00005 2.02 ± 1.13 3.62 ± 1.74 1.22 ± 0.94 1.17 ± 0.50 1.3 ± 0.46 o__Vibrionales_unclass.(85)
 OTU00006 2.07 ± 1.05 0.24 ± 0.14 2.08 ± 1.04 2.06 ± 1.07 1.62 ± 1.17 f__OCS155_unclass.
 OTU00010 0.63 ± 0.70 0.07 ± 0.09 2.42 ± 1.11 2.02 ± 1.02 3.67 ± 1.96 o__Oceanospirillales_unclass.
 OTU00011 0.8 ± 0.67 0.28 ± 0.35 1.69 ± 1.19 1.78 ± 0.74 0.98 ± 0.57 s__Psychrobacter pacificensis
 OTU00014 0.98 ± 1.17 0.28 ± 0.33 2.13 ± 1.13 1.81 ± 0.80 0.96 ± 0.84 f__Flavobacteriaceae_unclass.
 OTU00016 0.67 ± 0.72 0.78 ± 0.55 1.72 ± 0.96 1.42 ± 0.36 0.67 ± 0.074 s__Pseudoalteromonas porphyrae
 OTU00019 1.04 ± 0.98 0.03 ± 0.03 1.57 ± 0.84 1.76 ± 0.89 1.09 ± 0.82 f__Halomonadaceae unclass.
 Others 75.95 ± 4.83 88.78 ± 2.36 66.14 ± 8.33 64.17 ± 4.59 66.47 ± 8.04  
b) Back
 OTU00001 2.92 ± 2.39 2.55 ± 1.29 10.96 ± 4.01 8.33 ± 3.77 9.15 ± 4.74 f__Rhodobacteraceae_unclass.(86)
 OTU00002 7.57 ± 7.78 2.88 ± 2.61 4.49 ± 2.29 8.14 ± 3.86 10.57 ± 6.65 g__Alteromonas unclass.
 OTU00003 7.58 ± 5.39 1.36 ± 1.78 3.40 ± 1.37 7.77 ± 1.30 1.68 ± 1.26 f__Pelagibacteraceae_unclass.(99)
 OTU00004 0.90 ± 0.61 0.08 ± 0.15 3.36 ± 1.37 8.31 ± 1.56 2.19 ± 0.82 o__Flavobacteriales_unclass.
 OTU00005 1.49 ± 1.28 2.36 ± 0.90 1.81 ± 1.32 9.05 ± 0.42 1.76 ± 1.30 o__Vibrionales_unclass.(85)
 OTU00006 2.41 ± 1.65 0.26 ± 0.28 2.62 ± 0.91 10.15 ± 1.06 1.96 ± 0.53 f__OCS155_unclass.
 OTU00010 0.68 ± 0.91 0.04 ± 0.06 2.71 ± 1.10 11.44 ± 0.85 4.74 ± 3.34 o__Oceanospirillales_unclass.
 OTU00011 1.00 ± 1.05 0.39 ± 0.48 3.42 ± 3.06 13.18 ± 0.83 1.64 ± 0.37 s__Psychrobacter pacificensis
 OTU00014 0.88 ± 0.81 0.28 ± 0.34 2.15 ± 0.82 15.99 ± 0.89 1.28 ± 0.80 f__Flavobacteraceae_unclass.
 OTU00016 0.70 ± 0.63 1.34 ± 1.02 2.08 ± 0.95 20.33 ± 0.45 0.78 ± 0.30 s__Pseudalteromonas porphyrae
 OTU00019 1.08 ± 1.21 0.03 ± 0.05 1.89 ± 0.79 30.00 ± 1.03 1.50 ± 0.88 f__Halomonadaceae unclass.
 Others 72.78 ± 7.39 88.43 ± 3.13 61.10 ± 7.76 58.56 ± 19.04 62.75 ± 4.52