Fig. 4
From: Occurrence and expression of genes encoding methyl-compound production in rumen bacteria
Phylogenetic analysis of alcohol dehydrogenase (a) and aldehyde dehydrogenase (b) genes from rumen methanogen genomes and rumen MAGs. Both trees were constructed with the Jones-Taylor Thornton (JTT) model. Saccharomyces cerevisiae ATCC 204508 was used as the outgroup. Numbers represent the relative frequency of branch clustering based on 1000 bootstrap runs, bootstrap values < 50% are removed. Rumen MAGs; MEC1, Organism 3 (Methanosphaera sp.) from the pectin enrichment culture in this study; TAG1265, metagenome assembled Methanosphaera sp. sequences from low methane yield sheep datasets [35]; RUG761, metagenome assembled Methanosphaera sp. sequences from cattle [27]