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Table 2 Putative gene functions associated with the Calvin-Benson-Bassham Cycle

From: Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldi

Putative gene function

Number of copies in the metagenome

Percent identity

Alignment length (bp)

Fructose-bisphosphate aldolase class I

1

78.93

337

Fructose-bisphosphate aldolase class II

1

75.42

354

NAD-dependent glyceraldehyde-3-phosphate dehydrogenase

2

80.39

225.5

NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase

1

83.54

328

Phosphoglycerate kinase

1

71.58

285

Phosphoribulokinase

2

80.21

96

Ribose 5-phosphate isomerase A

4

73.16

71.75

Ribulose bisphosphate carboxylase

2

83.3

180

Ribulose-phosphate 3-epimerase

1

84.68

222

Transketolase

1

71.61

384

Transketolase, C-terminal section

2

62.81

112.5

Transketolase, N-terminal section

1

61.73

81

Triosephosphate isomerase

1

67.07

167