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Table 3 Putative gene functions involved in a complete TCA cycle identified by MG-RAST

From: Metagenomic analysis suggests broad metabolic potential in extracellular symbionts of the bivalve Thyasira cf. gouldi

Putative gene function

Number of copies

Percent identity

Alignment length (bp)

2-oxoglutarate dehydrogenase E1 component

1

70.33

209

Aconitate hydratase

5

65.53

109

Aconitate hydratase 2

1

72.11

190

Citrate synthase (si)

1

66.97

109

Dihydrolipoamide dehydrogenase

2

73.13

89

Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex

1

75.83

211

Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex

2

75

138.5

Fumarate hydratase class I, aerobic

2

88.05

163

Isocitrate dehydrogenase [NADP]

3

69.21

265.33

Malate dehydrogenase

2

63.59

209

Succinate dehydrogenase flavoprotein subunit

4

77.19

137.5

Succinate dehydrogenase iron-sulfur protein

1

70.83

144

Succinyl-CoA ligase [ADP-forming] alpha chain

3

81.71

185

Succinyl-CoA ligase [ADP-forming] beta chain

4

72.13

178