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Table 5 Log2 fold change and taxonomic affiliation of temporally changing OTUs in cloacal microbiota

From: Microbial environment shapes immune function and cloacal microbiota dynamics in zebra finches Taeniopygia guttata

Log2 fold change with experimental duration per day
OTU ID Mean of normalized counts log2FoldChange SE Wald statistic FDR q
 OTU828667 1.26 0.07 0.012 5.71 0.000
 OTU221299 4.06 −0.02 0.006 −3.79 0.018
 OTU1107027 0.78 −0.05 0.013 −3.67 0.019
 OTU955052 2.40 −0.03 0.008 −3.57 0.021
 OTU333178 0.53 −0.04 0.015 −2.91 0.094
 New.ReferenceOTU128 1.17 −0.04 0.012 −3.23 0.044
 OTU922761 0.44 0.06 0.019 3.22 0.044
 New.ReferenceOTU261 1.95 0.02 0.006 3.33 0.041
 New.ReferenceOTU434 1.17 0.03 0.009 3.03 0.072
Taxonomic affiliation
OTU ID Phylum Class Order Family Genus
 OTU828667 Actinobacteria Actinobacteria Actinomycetales Micrococcaceae unassigned
 OTU221299 Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus
 OTU1107027 Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus
 OTU955052 Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus
 OTU333178 Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus
 New.ReferenceOTU128 Firmicutes Bacilli Lactobacillales Lactobacillaceae Lactobacillus
 OTU922761 Proteobacteria Gammaproteobacteria Enterobacteriales Enterobacteriaceae unassigned
 New.ReferenceOTU261 Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter
 New.ReferenceOTU434 Proteobacteria Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter