Fig. 3

Comparisons between the human and baboon microbiomes in the oral cavity, gut and vagina. a Non-metric multidimensional scaling (NMDS) based on a Bray-Curtis distance matrix of microbial communities from baboon and human oral, gut and vagina. The colored lines surrounding each sample type are covariance ellipsoids. b Microbial alpha diversity in the human and baboon gut, oral cavity and vagina, as measured using the Shannon index of ASV-level bacteria. c Heatmap showing the 30 most abundant bacterial genera in human and baboon oral, nose and vagina