Table 1 Taxonomic divisions containing ASVs identified as differentially abundant between affected and unaffected tamarins and were that significantly different to an expected distribution
Taxonomy | Number of ASVs | Chi-square test results | ||||
|---|---|---|---|---|---|---|
Total | Affected | Unaffected | NDA | Test statistic | Corrected p-value | |
Family | ||||||
D_4__Lactobacillaceae | 17 | 14 (2) | 0 (2) | 3 (13) | 82.9 | <0.001 |
D_4__Ruminococcaceae | 15 | 0 (2) | 5 (1) | 10 (12) | 11.9 | 0.048 |
D_4__Helicobacteraceae | 8 | 4 (1) | 0 (1) | 4 (6) | 11.7 | 0.048 |
D_4__Succinivibrionaceae | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.063 |
Genus | ||||||
D_5__Lactobacillus | 17 | 14 (2) | 0 (2) | 3 (13) | 82.9 | <0.001 |
D_5__Blautia | 13 | 0 (2) | 5 (1) | 8 (10) | 14.6 | 0.027 |
D_5__Helicobacter | 8 | 4 (1) | 0 (1) | 4 (6) | 11.7 | 0.063 |
D_5__Lachnospiraceae UCG-008 | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.063 |
D_5__Flavonifractor | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.063 |
D_5__Lachnospiraceae NK3A20 group | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.063 |
D_5__Sarcina | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.063 |
D_5__Roseburia | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.060 |
Species | ||||||
D_6__Helicobacter jaachi | 3 | 3 (0) | 0 (0) | 0 (2) | 22.8 | 0.001 |
D_6__Bacteroidaceae bacterium DJF_B220 | 2 | 0 (0) | 2 (0) | 0 (2) | 20.2 | 0.002 |
D_6__Veillonella seminalis ACS-216-V-Col6b | 2 | 2 (0) | 0 (0) | 0 (2) | 15.2 | 0.014 |
D_6__Ruminococcus sp. Marseille-P328 | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.060 |
D_6__uncultured Sarcina sp. | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.060 |
D_6__Lachnospiraceae bacterium DJF_VP52 | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.060 |
D_6__uncultured Veillonellaceae bacterium | 1 | 0 (0) | 1 (0) | 0 (1) | 10.1 | 0.060 |