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Table 2 PERMANOVA results and subsequent conditional contrasts

From: Differential response of digesta- and mucosa-associated intestinal microbiota to dietary insect meal during the seawater phase of Atlantic salmon

Distance matrix Main effects Interaction Conditional contrasts
Diet Sample origin REF-DID
VS.
IM-DID 		REF-DIM
VS.
IM-DIM 		REF-DID
VS.
REF-DIM 		IM-DID
VS.
IM-DIM
Jaccard 0.001 0.001 0.001 0.001 0.001 0.001 0.001
Unweighted UniFrac 0.001a 0.001 0.001 0.001a 0.001 0.001 0.001
Aitchison 0.001 0.003 0.004 0.002 0.004 0.004a 0.002a
PHILR (Euclidean)b 0.001 0.001 0.001 0.001 0.005 0.001 0.001
  1. REF reference diet, IM insect meal diet, DID distal intestine digesta, DIM distal intestine mucosa
  2. aMonte Carlo p value
  3. bPhylogenetic isometric log-ratio transformed Euclidean distance
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Animal Microbiome

ISSN: 2524-4671