Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

Table 1 Taxonomic annotation^a and percentage relative abundances^b of the core taxa detected at the OTU level

Phylum	Class	Order	Family	Genus	OTU No.	Mean	SD	SEM
Spirochaetae	Spirochaetes	Spirochaetales	Spirochaetaceae	Treponema 2	3316660	3.41	1.74	0.21
Verrucomicrobia	WCHB1–41	uncultured bacterium	NA	NA	3316664	2.76	1.26	0.15
Verrucomicrobia	WCHB1–41	uncultured bacterium	NA	NA	3316661	2.26	1.16	0.14
Verrucomicrobia	WCHB1–41	uncultured bacterium	NA	NA	3316667	1.56	0.71	0.08
Firmicutes	Clostridia	Clostridiales	Lachnospiraceae	NA	33166634	1.26	0.84	0.10
Firmicutes	Clostridia	Clostridiales	Ruminococcaceae	Ruminococcaceae UCG − 005	33166612	0.88	0.62	0.07
Verrucomicrobia	WCHB1–41	uncultured bacterium	NA	NA	33166611	0.62	0.30	0.04
Firmicutes	Clostridia	Clostridiales	Family XIII	Mogibacterium	33166640	0.61	0.32	0.04

^aNA indicates that the taxonomic rank could not be annotated
^bPercentage relative abundances are given in terms of the mean (n = 70), standard deviation (SD) and standard error of the mean (SEM)

ISSN: 2524-4671