Skip to main content

Advertisement

Table 1 Taxonomic annotationa and percentage relative abundancesb of the core taxa detected at the OTU level

From: Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

PhylumClassOrderFamilyGenusOTU No.MeanSDSEM
SpirochaetaeSpirochaetesSpirochaetalesSpirochaetaceaeTreponema 233166603.411.740.21
VerrucomicrobiaWCHB1–41uncultured bacteriumNANA33166642.761.260.15
VerrucomicrobiaWCHB1–41uncultured bacteriumNANA33166612.261.160.14
VerrucomicrobiaWCHB1–41uncultured bacteriumNANA33166671.560.710.08
FirmicutesClostridiaClostridialesLachnospiraceaeNA331666341.260.840.10
FirmicutesClostridiaClostridialesRuminococcaceaeRuminococcaceae UCG − 005331666120.880.620.07
VerrucomicrobiaWCHB1–41uncultured bacteriumNANA331666110.620.300.04
FirmicutesClostridiaClostridialesFamily XIIIMogibacterium331666400.610.320.04
  1. aNA indicates that the taxonomic rank could not be annotated
  2. bPercentage relative abundances are given in terms of the mean (n = 70), standard deviation (SD) and standard error of the mean (SEM)