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Table 2 Taxonomic annotationa and percentage relative abundancesb of the core taxa detected at the genus level

From: Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

PhylumClassOrderFamilyGenusMeanSDSEM
VerrucomicrobiaWCHB1–41uncultured bacteriumNANA12.794.360.52
SpirochaetaeSpirochaetesSpirochaetalesSpirochaetaceaeTreponema 28.353.810.46
BacteroidetesBacteroidiaBacteroidalesBacteroidales S24–7 groupuncultured bacterium6.934.510.54
FibrobacteresFibrobacteriaFibrobacteralesFibrobacteraceaeFibrobacter6.334.130.49
FirmicutesClostridiaClostridialesLachnospiraceaeNA5.731.970.23
BacteroidetesBacteroidiaBacteroidalesRikenellaceaeRikenellaceae RC9 gut group4.961.880.22
FirmicutesClostridiaClostridialesRuminococcaceaeRuminococcaceae NK4A214 group2.350.940.11
BacteroidetesBacteroidiaBacteroidalesBacteroidales BS11 gut groupuncultured bacterium2.321.570.19
BacteroidetesBacteroidiaBacteroidalesBacteroidales RF16 groupuncultured bacterium2.011.140.14
FirmicutesClostridiaClostridialesRuminococcaceaeRuminococcus 11.880.860.10
FirmicutesClostridiaClostridialesRuminococcaceaeRuminococcaceae UCG-0051.580.940.11
FirmicutesClostridiaClostridialesRuminococcaceae[Eubacterium] coprostanoligenes group1.360.600.07
FirmicutesClostridiaClostridialesLachnospiraceaeLachnospiraceae NK4A136 group1.360.730.09
FirmicutesClostridiaClostridialesLachnospiraceaeLachnospiraceae XPB1014 group1.290.660.08
FirmicutesNegativicutesSelenomonadalesAcidaminococcaceaePhascolarctobacterium1.290.660.08
FirmicutesClostridiaClostridialesFamily XIIIMogibacterium0.650.360.04
  1. aNA indicates that the taxonomic rank could not be annotated
  2. bPercentage relative abundances are given in terms of the mean (n = 70), standard deviation (SD) and standard error of the mean (SEM)