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Table 2 Strains and plasmids used in this study

From: A diet-specific microbiota drives Salmonella Typhimurium to adapt its in vivo response to plant-derived substrates

Strains

Description and relevant features

references

S. Typhimurium ST4/74

NalR

[30]

ST4/74 ΔinvA

Non-polar invA deletion mutant

This study

ST4/74 ΔSTM3254

Non-polar STM3254 deletion mutant with zero growth phenotype in galactitol

[29]

ST4/74 ΔSTM3254::KanR

Mutant with allelic exchange of STM3254 against a kanamycin resistance gene

This study

ST4/74 ΔgatR-HTH

Partial non-polar deletion of gatR lacking the nucleotides encoding the helix-turn-helix motif (HTH)

This study

E. coli

  

DH5α

F– endA1 glnV44 thi-1 recA1 relA1 gyrA96 deoR nupG purB20 φ80ΔlacZΔM15 Δ(lacZYA-argF )U169, hsdR17 (rK–mK+), λ–

 

Plasmids

  

pBR322

AmpR, TetR

[31]

pBR-STM3254

pBR322 with gene STM3254

This study

pBR-gatR

pBR322 with repressor gene gatR

This study

pKD4

KanR, pir-dependent, FRT sites

[32]

pKD46

λ-Red helper plasmid, AmpR

[32]

pCP20

FLP recombinase plasmid, CmR, AmpR

[32]