Table 1 Overview of HTS results from the samples of this study
From: The genetic diversity of “papillomavirome” in bovine teat papilloma lesions
Identification sample | Total number of reads per sample | Number of BPV-related contigs | BPV related contigs length (nt) | Total number of BPV reads per contigs |
|---|---|---|---|---|
3672RS16/BR | 190,542 | 2 | 7215 | 509 |
7202 | 92,705 | |||
3689RS16/BR | 16,618 | 2 | 7139 | 6584 |
783 | 2314 | |||
3690RS16/BR | 264,016 | 1 | 2006 | 490 |
3880RS16/BR | 232,396 | 1 | 1838 | 568 |
3891RS16/BR | 233,268 | 3 | 5789 | 806 |
1876 | 59 | |||
1253 | 31 | |||
3895RS16/BR | 87,096 | 5 | 741 | 13,062 |
7288 | 406 | |||
7333 | 2054 | |||
7202 | 1469 | |||
7201 | 23,782 | |||
3896RS16/BR | 218,996 | 2 | 7619 | 292 |
7233 | 2106 | |||
4147RS16/BR | 252,508 | 2 | 7297 | 5766 |
7288 | 39,794 | |||
4150RS16/BR | 18,006 | 4 | 7699 | 36,477 |
7276 | 70,481 | |||
4131 | 3317 | |||
2117 | 63 | |||
4151RS16/BR | 19,142 | 1 | 3692 | 975 |
4182RS16/BR | 202,168 | 1 | 4513 | 517 |
4826RS16/BR | 222,824 | 3 | 7389 | 3767 |
7333 | 41,028 | |||
917 | 15 | |||
4827RS16/BR | 212,292 | 9 | 7212 | 2343 |
7241 | 11,596 | |||
7634 | 3747 | |||
7786 | 452 | |||
7389 | 16,011 | |||
7354 | 5184 | |||
7271 | 6698 | |||
7264 | 31,244 | |||
7186 | 14,236 | |||
4828RS16/BR | 223,378 | 2 | 7276 | 4701 |
7205 | 3811 | |||
4833RS16/BR | 219,088 | 1 | 7759 | 221 |
4834RS16/BR | 21,761 | 1 | 7839 | 695 |
3654RS16/BR | 268,184 | ND | ND | ND |
3670RS16/BR | 351,53 | ND | ND | ND |
3682RS16/BR | 254,736 | ND | ND | ND |
3686RS16/BR | 290,652 | ND | ND | ND |
3694RS16/BR | 1089 | ND | ND | ND |
4171RS16/BR | 19,722 | ND | ND | ND |
4836RS16/BR | 187,954 | ND | ND | ND |