Microbial composition differs between production systems and is associated with growth performance and carcass quality in pigs

Table 1 Summary of F-value and P-value of factors that significantly affected alpha diversity in the model

Factor	Observed		Chao1		Shannon		InvSimpson
Factor	F-value	P-value	F-value	P-value	F-value	P-value	F-value	P-value
Sire	5.265	< 0.0001	4.498	< 0.0001	2.593	< 0.0001	6.793	< 0.0001
System	422.419	< 0.0001	469.364	< 0.0001	26.357	< 0.0001	199.709	< 0.0001
Time	12,800.119	< 0.0001	13,998.892	< 0.0001	2454.014	< 0.0001	600.475	< 0.0001
CG(System)	41.81	< 0.0001	39.89	< 0.0001	24.043	< 0.0001	29.945	< 0.0001
Sire:Time	4.771	< 0.0001	4.458	< 0.0001	4.17	< 0.0001	4.546	< 0.0001
Time:System	237.41	< 0.0001	314.014	< 0.0001	88.095	< 0.0001	142.133	< 0.0001

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