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Table 3 The characteristics of co-occurrence networks of the four treatments at the end of Phase III (growth trial, 105 dof)

From: Impact of early-life rearing history on gut microbiome succession and performance of Nile tilapia

System (S)

FTS

BFS

P (permutation)

Diet (D)

M-NSP

H-NSP

M-NSP

H-NSP

S

D

Number of nodes

112

122

112

127

ns

**

Number of edges

475

497

596

574

**

ns

Positive/negative ratio

2.8

2.6

4.6

3.9

**

ns

Average degree

8.48

8.15

10.74

9.04

ns

**

Clustering coefficient

0.68

0.56

0.62

0.61

ns

***

Density

0.076

0.067

0.096

0.072

ns

***

Path length

3.44

3.34

3.01

3.36

ns

ns

Modularity

1.51

1.57

0.89

0.86

***

ns

  1. P values were calculated using Mann–Whitney test, after permutation of 70% of the initial data
  2. FTS flow-through system, BFS biofloc system, M-NSP moderate NSP diet, H-NSP high NSP diet, S larval rearing system in Phase I, D diet type in Phase III, ns not significant
  3. **P < 0.01; ***P < 0.001