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Fig. 4 | Animal Microbiome

Fig. 4

From: Consistent changes in the intestinal microbiota of Atlantic salmon fed insect meal diets

Fig. 4

The insect meal diet markedly modulated the salmon intestinal microbiota in both digesta (a) and mucosa (b), irrespective of intestinal segments. The dimensionality reduction was performed using a compositional beta-diversity metric called robust Aitchison PCA and visualized by the EMPeror [90]. The height-to-width ratio of the PCoA plot was set to reflect the ratio between the corresponding eigenvalues as recommended [91]. Abbreviations: REF, reference diet; IM, insect meal diet; PID, proximal intestine digesta; DID, distal intestine digesta; PIM, proximal intestine mucosa; DIM, distal intestine mucosa; PCo, principal coordinate

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