From: Expressions of resistome is linked to the key functions and stability of active rumen microbiome
ARG classes | Metagenomic profiling | Metatranscriptomic profiling | ||
---|---|---|---|---|
Read-based | Assembly-based | Read-based | Assembly-based | |
Total | 183 | 103 | 60 | 37 |
 Aminoglycoside | 18 | 10 | 5 | 1 |
 Bacitracin | 3 | 2 | 1 | 2 |
 Beta-lactam | 29 | 7 | 9 | 1 |
 Bleomycin | 1 | – | – | – |
 Carbomycin | 1 | 1 | – | 1 |
 Chloramphenicol | 5 | 3 | – | – |
 Fosfomycin | 1 | 1 | – | – |
 Fosmidomycin | 1 | 1 | – | – |
 Kasugamycin | – | 1 | – | – |
 MLS | 29 | 16 | 10 | 3 |
 MDR | 42 | 20 | 13 | 9 |
 Polymyxin | 1 | – | 1 | – |
 Quinolone | 2 | 1 | – | – |
 Rifamycin | 2 | 1 | – | – |
 Sulfonamide | 2 | 3 | 1 | 1 |
 Tetracenomycin | 1 | 16 | – | – |
 Tetracycline | 23 | – | 14 | 13 |
 Trimethoprim | – | 2 | – | – |
 Unclassified | 7 | 3 | 2 | 2 |
 Vancomycin | 15 | 15 | 4 | 4 |