Skip to main content

Table 2 Permutational analysis of variance (PERMANOVA) testing pairwise comparisons for pyloric caeca (PC) samples from different AGD severity groups

From: Links between host genetics, metabolism, gut microbiome and amoebic gill disease (AGD) in Atlantic salmon

Groups

F

R2

p.value

p.adjusted

Significance

AGD0 versus AGD1

2.97640

0.03167

0.017

0.025

*

AGD0 versus AGD2

3.91483

0.04306

0.002

0.006

**

AGD0 versus AGD3

6.17319

0.06288

0.001

0.006

**

AGD1 versus AGD2

1.50253

0.06987

0.161

0.161

 

AGD1 versus AGD3

3.43869

0.12091

0.012

0.024

*

AGD2 versus AGD3

1.96371

0.08551

0.078

0.093

 
  1. Distance matrix calculated by weighted UniFrac measure. Permutations used: 9999. Significance codes: **p < 0.01; *p < 0.05