Site | Rank | Control (Genus) | η% | MRF (Genus) | η% |
---|---|---|---|---|---|
Duodenum | 1 | Lactobacillus | 71.153 | Lactobacillus | 48.579 |
 | 2 | Bifidobacterium | 21.083 | Pseudomonas | 34.323 |
 | 3 | Pseudomonas | 3.670 | Halomonas | 7.813 |
 | 4 | Clostridioides | 2.305 | Shewanella | 4.285 |
 | 5 | Halomonas | 0.745 | Bifidobacterium | 2.223 |
 | 6 | Shewanella | 0.554 | Faecalibacterium | 0.673 |
 | 7 | Staphylococcus | 0.301 | Blautia | 0.651 |
 | 8 | Faecalibacterium | 0.238 | Staphylococcus | 0.234 |
 | 9 | Escherichia | 0.142 | Corynebacterium | 0.189 |
 | 10 | Blautia | 0.139 | Ruminococcus | 0.108 |
Jejunum | 1 | Lactobacillus | 81.649 | Lactobacillus | 94.982 |
 | 2 | Bifidobacterium | 12.749 | Bifidobacterium | 3.564 |
 | 3 | Clostridioides | 1.785 | Staphylococcus | 0.218 |
 | 4 | Escherichia | 0.517 | Pseudomonas | 0.160 |
 | 5 | Agarivorans | 0.196 | Corynebacterium | 0.132 |
 | 6 | Pseudomonas | 0.146 | Faecalibacterium | 0.087 |
 | 7 | Halomonas | 0.045 | Blautia | 0.051 |
 | 8 | Streptococcus | 0.040 | Halomonas | 0.026 |
 | 9 | Staphylococcus | 0.036 | Streptococcus | 0.025 |
 | 10 | Shigella | 0.035 | Weissella | 0.022 |
Ileum | 1 | Lactobacillus | 84.029 | Lactobacillus | 87.716 |
 | 2 | Bifidobacterium | 9.845 | Bifidobacterium | 9.994 |
 | 3 | Escherichia | 2.053 | Ca. Arthromitus | 1.015 |
 | 4 | Ca. Arthromitus | 1.501 | Corynebacterium | 0.173 |
 | 5 | Clostridioides | 0.443 | Escherichia | 0.094 |
 | 6 | Streptococcus | 0.429 | Staphylococcus | 0.082 |
 | 7 | Shigella | 0.258 | Romboutsia | 0.075 |
 | 8 | Agarivorans | 0.135 | Pseudomonas | 0.051 |
 | 9 | Romboutsia | 0.110 | Agarivorans | 0.021 |
 | 10 | Corynebacterium | 0.049 | Jeotgalicoccus | 0.017 |
Cecum | 1 | Faecalibacterium | 51.748 | Faecalibacterium | 54.531 |
 | 2 | Bifidobacterium | 15.388 | Blautia | 11.548 |
 | 3 | Blautia | 5.372 | Lactobacillus | 7.422 |
 | 4 | Barnesiella | 3.716 | Eubacterium | 3.423 |
 | 5 | Lachnoclostridium | 3.588 | Lachnoclostridium | 3.232 |
 | 6 | Ruminococcus | 2.689 | Ruminococcus | 3.125 |
 | 7 | Eubacterium | 2.503 | Bacteroides | 2.364 |
 | 8 | Bacteroides | 2.364 | Bifidobacterium | 2.036 |
 | 9 | Lactobacillus | 2.117 | Pseudoflavonifractor | 1.823 |
 | 10 | Escherichia | 1.734 | Barnesiella | 1.675 |