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Table 1 Comparison between amplicon sequence variant (ASV) preprocessing of the original 4339

From: Geography and elevation as drivers of cloacal microbiome assemblages of a passerine bird distributed across Sulawesi, Indonesia

 

ASVs

Samples

Mean ASV per sample

Transformed

3445

40

95.3

Rarified

3028

38

86.1

  1. Transformed reads were log transformed with all samples below 0.00001 removed, while rarified reads were randomly subset to 3028 reads per sample