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Table 1 Significant differences in alpha diversity indices in pairwise comparisons between treatments

From: Performance of distinct microbial based solutions in a Campylobacter infection challenge model in poultry

 

Aviguard

Bacitracin

Bacitracin_Control

CEL

Probiotic_Bacteria

Probiotic_Yeast

Untreated

30-day samples

Observed

Bacitracin

**

      

Bacitracin_Control

–

*

     

CEL

**

–

**

    

Probiotic_Bacteria

***

**

***

**

   

Probiotic_Yeast

**

–

**

–

***

  

Untreated

**

–

*

–

***

–

 

Untreated_Control

**

**

**

***

***

***

***

Chao1

Bacitracin

*

      

Bacitracin_Control

–

*

     

CEL

**

–

**

    

Probiotic_Bacteria

***

**

***

***

   

Probiotic_Yeast

*

–

**

–

***

  

Untreated

*

–

*

*

***

–

 

Untreated_Control

**

***

**

***

***

***

***

Shannon

Bacitracin

**

      

Bacitracin_Control

***

–

     

CEL

***

–

–

    

Probiotic_Bacteria

***

***

***

***

   

Probiotic_Yeast

***

–

–

–

**

  

Untreated

***

–

**

–

**

–

 

Untreated_Control

***

–

–

–

***

–

**

Simpson

Bacitracin

**

      

Bacitracin_Control

***

–

     

CEL

***

–

–

    

Probiotic_Bacteria

***

**

**

**

   

Probiotic_Yeast

***

–

–

–

*

  

Untreated

***

–

*

*

**

–

 

Untreated_Control

**

–

–

–

**

–

–

39-day samples

Observed

Bacitracin

***

      

Bacitracin_Control

–

***

     

CEL

***

***

***

    

Probiotic_Bacteria

***

*

***

***

   

Probiotic_Yeast

***

–

***

***

–

  

Untreated

**

***

*

*

***

***

 

Untreated_Control

***

***

***

***

***

***

***

Chao1

Bacitracin

***

      

Bacitracin_Control

–

***

     

CEL

***

***

**

    

Probiotic_Bacteria

***

*

***

***

   

Probiotic_Yeast

***

–

***

***

–

  

Untreated

***

***

*

*

***

***

 

Untreated_Control

***

***

**

***

***

***

***

Shannon

Bacitracin

**

      

Bacitracin_Control

*

**

     

CEL

*

**

–

    

Probiotic_Bacteria

**

–

*

–

   

Probiotic_Yeast

***

–

***

***

–

  

Untreated

**

*

**

-

–

***

 

Untreated_Control

–

**

–

*

**

***

***

Simpson

Bacitracin

*

      

Bacitracin_Control

–

*

     

CEL

–

*

–

    

Probiotic_Bacteria

*

–

–

–

   

Probiotic_Yeast

**

–

**

**

–

  

Untreated

*

–

–

*

–

*

 

Untreated_Control

–

*

–

–

–

**

*

  1. P-values were calculated using post-hoc pairwise Wilcoxon rank sum tests for four indices (Observed, Chao1, Shannon, Simpson). Samples are grouped by time point
  2. *p < 0.05; **p < 0.01; ***p < 0.001
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Animal Microbiome

ISSN: 2524-4671