Table 2 Antimicrobial resistance genes where recovery within the fecal sample was increased compared to the capsule sample
Antimicrobial class | Region | P value Mc Nemar test |
|---|---|---|
Aminoglycoside | aadK_NT.1.1 | 0.0133 |
ant6prime-ib_NT.1 | 0.0133 | |
aph2prime-Ib_NT.1 | 0.0133 | |
aph2prime-Ib_NT.1.1 | 0.0412 | |
aphA3_NT.1 | 0.0077 | |
Beta lactam | Cfxa_NT.1 | 0.0233 |
Multidrug efflux | Cmr.C.glutamicum_NT.1 | 0.0133 |
Cmr.E.coli_NT.1 | 0.0233 | |
Macrolide | Ermq_NT.1 | 0.0233 |
macA.Kp_NT.1 | 0.0077 | |
macA.Kp_NT.1.1 | 0.0233 | |
macB.Kp_NT.1 | 0.0077 | |
Lincosamide/streptogramin | Lsae_NT.1.1 | 0.0077 |
Streptothricin | Sat4_NT.1 | 0.0455 |
Tetracycline | Tet40_NT.1 | 0.0412 |
Tet44_NT.1 | 0.0412 | |
Tetm_NT.1 | 0.0412 | |
Tetm_NT.1.1 | 0.0133 | |
Tetw_NT.1 | 0.0412 | |
Tety_NT.1 | 0.0233 |