Animal Microbiome

Aims and scope

Animal Microbiome is a community-focused journal welcoming all animal microbiome studies relating to domestic and non-domestic animals. The journal welcomes submissions which go beyond measurements of diversity and move towards a functional understanding of animal-associated microbiomes. Animal Microbiome is a sister journal to Microbiome.

Articles

The modulation of intestinal commensal bacteria possibly contributes to the growth and immunity promotion in Epinephelus akaara after feeding the antimicrobial peptide Scy-hepc

Authors: Hang Sun, Luxi Wang, Fangyi Chen, Xiangyu Meng, Wenbin Zheng, Hui Peng, Hua Hao, Huiyun Chen and Ke-Jian Wang

Content type: Research 8 October 2024
Microbiome signature suggestive of lactose-intolerance in rhesus macaques (Macaca mulatta) with intermittent chronic diarrhea

Authors: Annemiek Maaskant, Bas Voermans, Evgeni Levin, Marcus C. de Goffau, Nicole Plomp, Frank Schuren, Edmond J. Remarque, Antoine Smits, Jan A. M. Langermans, Jaco Bakker and Roy Montijn

Content type: Research 23 September 2024
Relationship between the rumen microbiome and liver transcriptome in beef cattle divergent for feed efficiency

Authors: Kate Keogh, David A. Kenny, Pamela A. Alexandre, Sinead M. Waters, Emily McGovern, Mark McGee and Antonio Reverter

Content type: Research 20 September 2024
The early life microbiome of giant grouper (Epinephelus lanceolatus) larvae in a commercial hatchery is influenced by microorganisms in feed

Authors: Jin Yan Lim, Yun Kit Yeoh, Maximiliano Canepa, Richard Knuckey, Dean R. Jerry and David G. Bourne

Content type: Research 17 September 2024
In vitro and ex vivo metabolism of chemically diverse fructans by bovine rumen Bifidobacterium and Lactobacillus species

Authors: Marissa L. King, Xiaohui Xing, Greta Reintjes, Leeann Klassen, Kristin E. Low, Trevor W. Alexander, Matthew Waldner, Trushar R. Patel and D. Wade Abbott

Content type: Research 9 September 2024

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Effect of the macroalgae Asparagopsis taxiformis on methane production and rumen microbiome assemblage

Authors: Breanna Michell Roque, Charles Garrett Brooke, Joshua Ladau, Tamsen Polley, Lyndsey Jean Marsh, Negeen Najafi, Pramod Pandey, Latika Singh, Robert Kinley, Joan King Salwen, Emiley Eloe-Fadrosh, Ermias Kebreab and Matthias Hess

Content type: Research article 12 February 2019

The Correction to this article has been published in Animal Microbiome 2019 1:4
The gut microbiome of horses: current research on equine enteral microbiota and future perspectives

Authors: Anne Kauter, Lennard Epping, Torsten Semmler, Esther-Maria Antao, Dania Kannapin, Sabita D. Stoeckle, Heidrun Gehlen, Antina Lübke-Becker, Sebastian Günther, Lothar H. Wieler and Birgit Walther

Content type: Review 13 November 2019
MAP, Johne’s disease and the microbiome; current knowledge and future considerations

Authors: Chloe Matthews, Paul D. Cotter and Jim O’ Mahony

Content type: Review 7 May 2021
Faecal inoculations alter the gastrointestinal microbiome and allow dietary expansion in a wild specialist herbivore, the koala

Authors: Michaela D. J. Blyton, Rochelle M. Soo, Desley Whisson, Karen J. Marsh, Jack Pascoe, Mark Le Pla, William Foley, Philip Hugenholtz and Ben D. Moore

Content type: Research article 21 August 2019
Welcome to Animal Microbiome

Authors: Sharon A. Huws

Content type: Editorial 5 February 2019

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OPEN FOR SUBMISSIONS

Thematic series
AI Innovations in Animal Microbiome Research

Thematic series
Advancements in Probiotics: Harnessing Microbial Communities for Sustainable food production

Cross-journal collection
Food security and sustainability from a microbiology perspective

Thematic series
Engineering optimal livestock microbiomes

Cross-journal collection
Life at the extreme

CLOSED COLLECTIONS

Thematic series
Microbiomes in Wild Animals: In captivity and the field

Cross-journal collection
Antimicrobial resistance and the microbiome

Cross-journal collection
The microbiota–gut–brain axis

Thematic series
Gut Microbiome and Animal Health

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Open article collections

AI Innovations in Animal Microbiome Research

This Collection presents the latest AI-driven innovations that are transforming our understanding of the complex interactions between animals and their microbiomes.

Advancements in Probiotics: Harnessing Microbial Communities for Sustainable food production

This Collection compiles cutting-edge research on using probiotics in farming and aquaculture to enhance animal health, boost productivity, and promote sustainability.

In Review: preprint service on Animal Microbiome

Animal Microbiome, in partnership with Research Square, is offering In Review - a preprint service to all authors.

At the time of submission, authors can choose this free optional service whereby their submitted manuscript will be hosted specifically on Animal Microbiome's In Review preprint platform. Authors will then be able to:

Share their work with fellow researchers to read, comment on, and cite even before publication
Showcase their work to funders and others with a citable DOI while it is still under review
Track their manuscript - including seeing when reviewers are invited, and when reports are received

See what the Animal Microbiome In Review platform looks like.