Table 2 Network topologies of the gut and soil microbiota
From: Gut microbiome reflect adaptation of earthworms to cave and surface environments
Aporrectodea rosea | Allolobophora chlorotica | |||||||
|---|---|---|---|---|---|---|---|---|
Surface (Site 3) | Cave (Site2) | Surface (Site 4) | Cave (Site 1) | |||||
Gut | Soil | Gut | Soil | Gut | Soil | Gut | Soil | |
Modularity | 0.36 | 0.35 | 0.51 | 0.26 | 0.45 | 0.20 | 0.38 | 0.24 |
Nodes | 140 | 189 | 102 | 164 | 98 | 185 | 107 | 177 |
Edges | 673 | 1421 | 290 | 1772 | 336 | 2732 | 432 | 2070 |
Degree | 9.6 | 15.0 | 5.6 | 21.6 | 6.85 | 29.5 | 8.07 | 23.3 |
Path length | 3.1 | 2.7 | 3.56 | 2.4 | 3.1 | 2.33 | 3.3 | 2.5 |
Connectance | 0.07 | 0.08 | 0.06 | 0.13 | 0.07 | 0.16 | 0.08 | 0.13 |
Diameter | 9 | 6 | 8 | 7 | 8 | 7 | 8 | 7 |
Positive edges (P) | 329 | 745 | 169 | 948 | 189 | 1430 | 229 | 1038 |
Negative edges (N) | 344 | 676 | 121 | 824 | 147 | 1302 | 203 | 1032 |
P/N | 0.95 | 1.10 | 1.39 | 1.15 | 1.28 | 1.09 | 1.12 | 1.01 |